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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826303.1_cds_XP_016502620.1_16241
CDS Infomation

[gene=LOC107820793] [db_xref=GeneID:107820793] [protein=pentatricopeptide repeat-containing protein At3g42630-like] [protein_id=XP_016502620.1] [location=complement(join(4746..5903,6354..6440))] [gbkey=CDS]
Sequence

ATGGCAGTTGGGTTAGTTGTGTCCACAGCCTTCGCATCGGCAACTCCAAAACCAAGTCCC
TTTTGGTATCAATCTTCTGCAGAAAAGAGACCGTGGCGCAAGAAACAGGGAGGAAATATT
AATCGACATGGTACTTATGCAGATTGTGCTTCACAGATACAGGGCTTCACTAGGAAAAAA
TTGCCTTTTGCTGCTGAAAGGCTTTTCCTTGATATGAAATCTGAAGGTTTTATACCTGAT
AACTCTACCTTGTCAGCACTGATGCTATGCTATGCCGGTAATGGTTTATTTGCCAAAGCA
TTAGCTGCTTGGGATGAAATTTTAATCAGTTCATTTCTGCCAGATGTTCGTGTAATTGTA
GAACTGATTAATATCTGTGGCTGCAATGGATATATCGACGTCGCTGTTAGAATATTGCAT
CAAATTCAGTTGAAAGATTCCGACCTGCTTCCTGATATTTATGCTCGGGTTATCTCTCGT
TTTGGAAAGAGAGGACAGCTTGAGTTGATGGAAATTATGTTGGAACAGATGGTTTCCATG
GGGTTCCCTGTTGATTCTGCTACCGGAAATGCTTATGTAATATACTACAGCAATTTTGGT
ACGCTGAGTGACATGGAAGTTGCATATGGCCGTCTTAAGATGTCAAGAATTCTTATAGAG
GAAGAGGCGATCAGGTCAATCTCCTTGGCTTATCTGAAGAGAGAGAAGTTTTATAGTTTA
GGTCAGTTTGTAAGAGATGTGGGCCTTTGTCGGAGAAATGTGGGAAATCTCCTATGGAAC
CTGTTACTTCTTTCTTATGCTGCCAACTTCAAAATGAAAAGTTTGCAGAGAGAATTTGTG
AGAATGGTAGAAAGTGGATTTTTTCCTGATCTTACTACTTTCAATATTAGAGCTTTGGCG
TTTTCAAAAATGTCATTGTTTTGGGATCTGCATGTAACACTTGAACATATGAAGCATGAG
AAGGTAGTTCCCGATCTTGTGACTTACGGTTCTGTTGTTGATGCGTACTTGGATAGAAGT
CTGGGACGAAATTTGGATTTTGCTTTACAGAAATTGAATACATATGATTGTGTTACAATA
GCAACAGAACCCCTTGTGTTTGAGGCCATGGGGAAAGGGGATTTCCACTTAAGCTCAGAG
GCACGTTTGGAGTTCAGTAAGAAAAAGAATTGGACATATGAGGAGCTTATCACAATCTAT
CTCAAGAAATACGTCCGGCGTAATCAAATATTTTGGAACTACTGA

Peptide Sequence

PEP ID

XP_016502620.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Nicotiana tabacum]
Sequence

MAVGLVVSTAFASATPKPSPFWYQSSAEKRPWRKKQGGNINRHGTYADCASQIQGFTRKK
LPFAAERLFLDMKSEGFIPDNSTLSALMLCYAGNGLFAKALAAWDEILISSFLPDVRVIV
ELINICGCNGYIDVAVRILHQIQLKDSDLLPDIYARVISRFGKRGQLELMEIMLEQMVSM
GFPVDSATGNAYVIYYSNFGTLSDMEVAYGRLKMSRILIEEEAIRSISLAYLKREKFYSL
GQFVRDVGLCRRNVGNLLWNLLLLSYAANFKMKSLQREFVRMVESGFFPDLTTFNIRALA
FSKMSLFWDLHVTLEHMKHEKVVPDLVTYGSVVDAYLDRSLGRNLDFALQKLNTYDCVTI
ATEPLVFEAMGKGDFHLSSEARLEFSKKKNWTYEELITIYLKKYVRRNQIFWNY

Transcript Sequence

Gene sequence data has not been registered.